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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs116479497 chr3:128545382 G/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs116496956 chr2:142871473 C/T PRHOXNB chr13:28552243-28562774:- 0.57 7.65 4.54E-10 Box Plot
ACC rs116509225 chr3:116068211 G/A OR6C3 chr12:55725485-55726420:+ 1 7.9 1.86E-10 Box Plot
ACC rs11657810 chr17:32525096 A/G TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs116668488 chr3:116134113 A/T OR6C3 chr12:55725485-55726420:+ 1 9.25 1.45E-12 Box Plot
ACC rs116835720 chr3:128547280 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs11694350 chr2:79219390 G/A GAGE2D chrX:49207160-49214420:+ 0.78 8.27 4.71E-11 Box Plot
ACC rs117045307 chr18:37088004 C/T PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs11719988 chr3:69196868 T/C PRHOXNB chr13:28552243-28562774:- -0.61 -7.59 5.76E-10 Box Plot
ACC rs117272700 chr8:123610935 G/A PRHOXNB chr13:28552243-28562774:- 0.56 7.81 2.59E-10 Box Plot
ACC rs117337787 chr11:8461163 C/T PRHOXNB chr13:28552243-28562774:- 0.63 7.65 4.54E-10 Box Plot
ACC rs117381436 chr11:8461363 C/T PRHOXNB chr13:28552243-28562774:- 0.63 7.65 4.54E-10 Box Plot
ACC rs117411536 chr19:50034766 A/G OR5V1 chr6:29323007-29399744:- 0.56 7.6 5.55E-10 Box Plot
ACC rs117495528 chr11:97440867 G/C PRHOXNB chr13:28552243-28562774:- 0.63 8.07 9.78E-11 Box Plot
ACC rs117602417 chr18:37094786 C/A PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot